miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|226339577|gb|FK822347.1|FK822347 GCACTTCAACTACAGATACTTTGAGATCGAAGAGGAAGATGGTACTAAGCAGTGGTGGTTTGGTGGAGGCACAGACCTGA
CTCCAGTTTATATTAATAAAGAAGATGCATTTCACTTCCACAACACCCTGAAGGAGGCCTGTGACAAGCACCACCACCAG
TACTATCCAGACTTCAAGAAATGGTGTGACCGATACTTCTACATCCGACACAGAGGAGAGACTCGGGGTATAGGAGGGAT
CTTCTTCGATGACCTGGACTCTCCGAGTCAGGAGGAGGCATTCAACTTCGTCCAGAGCTGTGCCCGCACCGTGGTGCCCT
GTTACCTGCCCATTGTATACAAACACCTCAACGACTCCTTTACTGATGAGAACAAAGGCTGGCAGCAGGTACGACGAGGA
AGATATGTGGAGTTCAACCTGGTGTATGACAGGGGAGTGAAGTTTGGCTTGGCCACGCCTGGCTCCAGAATTGAGAGCAT
TCTCATGTCCCTCCCCCTCACTGCCAGGTGGGAGTACATGCATGAGCCTGCCAAAGGTACCATGGAGGCTGAGATGCTGG
AGGTGTTACGAAACCCCAAGGAGTGGGTGTAACCACCACCGTGTTCACATGTCAATATGGACAAATCCTCCAAAACCGTC
TTTGTTGTATTATATAATGGTGTCACCTGTCTAGATCAGCAGCAGTTAACACTGTGTTTACCAAAATAATATTGCATTGC
ATGTGTCTGAAAAGTTTTTTA




Most similar to sp|P36551|HEM6_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P36551|HEM6_HUMAN Coproporphyrinogen-III oxidase, mitochondrial
           OS=Homo sapiens GN=CPOX PE=1 SV=3
          Length = 454

 Score =  335 bits (858), Expect = 2e-91
 Identities = 149/196 (76%), Positives = 168/196 (85%)
 Frame = +2

Query: 2   HFNYRYFEIEEEDGTKQWWFGGGTDLTPVYINKEDAFHFHNTLKEACDKHHHQYYPDFKK 181
           HFNYRYFE+EE DG KQWWFGGG DLTP Y+N+EDA HFH TLKEACD+H    YP FKK
Sbjct: 258 HFNYRYFEVEEADGNKQWWFGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDLYPKFKK 317

Query: 182 WCDRYFYIRHRGETRGIGGIFFDDLDSPSQEEAFNFVQSCARTVVPCYLPIVYKHLNDSF 361
           WCD YF+I HRGE RGIGGIFFDDLDSPS+EE F FVQSCAR VVP Y+P+V KH +DSF
Sbjct: 318 WCDDYFFIAHRGERRGIGGIFFDDLDSPSKEEVFRFVQSCARAVVPSYIPLVKKHCDDSF 377

Query: 362 TDENKGWQQVRRGRYVEFNLVYDRGVKFGLATPGSRIESILMSLPLTARWEYMHEPAKGT 541
           T + K WQQ+RRGRYVEFNL+YDRG KFGL TPGSRIESILMSLPLTARWEYMH P++ +
Sbjct: 378 TPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWEYMHSPSENS 437

Query: 542 MEAEMLEVLRNPKEWV 589
            EAE+LEVLR+P++WV
Sbjct: 438 KEAEILEVLRHPRDWV 453